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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Ptpn11'

Total of fusion sequences: 9 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_011202.3
1..5535
100.0%
-
5

XM_006512536.3
5353..5543
99.5%
-
10
3
0
0
exon-intron
2
Mus musculus

NM_011202.3
1..5611
100.0%
-
5

XM_006512536.3
5421..5618
95.9%
-
10
3
0
0
exon-intron
3
Mus musculus

NM_011202.3
1..5599
100.0%
-
5

XM_006512536.3
5409..5606
95.9%
-
10
3
0
0
exon-intron
4
Mus musculus

NM_011202.3
93..1859
99.9%
-
5

NM_008688.3
1860..2030
100.0%
+
10
1
0
0
exon-exon
5
Mus musculus

NM_011202.3
1..2530
100.0%
-
5

XM_006512536.3
2348..2538
99.5%
-
10
3
0
0
exon-intron
6
Mus musculus

NM_011202.3
1..558
99.1%
-
5

XM_006512536.3
375..573
98.5%
-
10
3
0
0
exon-intron
7
Mus musculus

XM_006512536.3
8..202
96.4%
+
10

NM_011202.3
15..426
100.0%
+
5
3
0
3
intron-exon
8
Mus musculus

NM_011202.3
1..84
100.0%
+
5

NM_008740.4
78..140
100.0%
-
11
1
0
0
exon-exon
9
Mus musculus

NM_011202.3
1..306
95.3%
+
5

XM_006530340.3
273..499
96.2%
+
5
1
0
0
intron-intron

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