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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Prxl2c'

Total of fusion sequences: 6 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XR_872708.2
32..691
99.4%
-
12

ENSMUST00000222570
691..718
96.0%
+
13
1
0
0
exon-exon
2
Mus musculus

NM_025370.2
1..508
99.9%
+
13
Gm31128
XR_382570.2
509..620
99.9%
+
13
1
0
0
exon-intron
3
Mus musculus
LOC108169009
XR_001784557.1
80..258
95.0%
+
4

ENSMUST00000222570
94..597
96.6%
-
13
1
0
0
intron-exon
4
Mus musculus

ENSMUST00000222570
44..424
99.5%
-
13
4930401C15Rik
NR_045349.1
416..442
100.0%
+
10
1
0
0
exon-intron
5
Mus musculus
Cdh12
Q5RJH3

XM_011245345.2
18..48
100.0%
-
15

ENSMUST00000222570
42..697
97.7%
+
13
1
0
0
intron-exon
6
Mus musculus

NM_026390.2
19..487
99.6%
+
1

ENSMUST00000221399
482..740
95.0%
-
13
1
0
0
exon-intron

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