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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Pkd1'

Total of fusion sequences: 5 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_001286713.1
1..79
100.0%
-
17

XM_006523834.2
74..790
99.6%
+
17
1
0
0
exon-exon
2
Mus musculus

XM_006523834.2
50..188
100.0%
+
17

NM_009765.3
184..208
100.0%
-
5
1
0
0
exon-intron
3
Mus musculus

XM_006523834.2
12..578
99.7%
+
17
Dynlt1a
A0A338P7B7

NM_001166629.2
575..598
100.0%
-
17
1
0
0
exon-exon
4
Mus musculus

XM_006514335.3
3..80
100.0%
+
10

XM_006523834.2
70..235
96.3%
-
17
1
0
0
exon-exon
5
Mus musculus

XM_006523834.2
69..232
96.0%
-
17

NM_019737.2
172..342
95.1%
+
18
1
0
0
intron-intron

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