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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Pink1'

Total of fusion sequences: 6 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs Scrt1
Q99M85

NM_130893.3
164..320
96.2%
-
15

NM_026880.2
309..579
100.0%
-
4
1
0
0
exon-exon
2
Mus musculus

XM_011245994.2
9..28
100.0%
+
16

NM_026880.2
28..526
95.6%
+
4
1
0
0
intron-exon
3
Mus musculus

XM_006505886.2
1..222
98.2%
-
6

NM_026880.2
223..405
99.0%
-
4
1
0
0
exon-exon
4
Mus musculus

NM_001037940.4
11..212
96.3%
-
5

NM_026880.2
37..357
100.0%
-
4
1
0
0
intron-intron
5
Mus musculus

XM_006520180.3
19..41
100.0%
-
15

NM_026880.2
42..429
98.0%
+
4
1
0
0
intron-exon
6
Mus musculus

NM_026880.2
15..435
99.8%
-
4

ENSMUST00000013737
432..467
100.0%
+
1
1
0
0
exon-intron

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