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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Phgdh'

Total of fusion sequences: 14 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_024446338.1
19..400
95.9%
-
1

NM_001291163.1
395..553
98.2%
-
1
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_019111.4
15..189
95.4%
+
6

XM_024446338.1
184..239
98.3%
+
1
1
0
0
exon-exon
3
Homo Sapiens

NM_006408.3
2..806
99.9%
-
7

ENST00000641597
746..834
98.0%
-
1
1
0
0
exon-intron
4
Homo Sapiens

XM_011530285.1
5..26
100.0%
-
22

XM_024446338.1
24..440
98.4%
-
1
1
0
0
intron-exon
5
Homo Sapiens

XM_011530285.1
5..26
100.0%
-
22

XM_024446338.1
24..440
97.7%
-
1
1
0
0
intron-exon
6
Homo Sapiens

XM_024446338.1
7..422
99.8%
+
1

NM_014141.5
419..439
100.0%
-
7
1
0
0
exon-intron
7
Homo Sapiens

XM_024446338.1
7..422
99.8%
+
1

NM_014141.5
419..439
100.0%
-
7
1
0
0
exon-intron
8
Homo Sapiens

NM_022766.5
8..33
100.0%
+
22

XM_024446338.1
31..479
100.0%
-
1
2
0
9
intron-exon
9
Homo Sapiens

NM_022766.5
8..33
100.0%
+
22

XM_024446338.1
31..488
100.0%
-
1
2
0
9
intron-exon
10
Homo Sapiens

XM_024446338.1
11..427
99.8%
+
1
LINC00856
ENST00000635545
424..444
100.0%
+
10
1
0
0
exon-intron

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