Result for the search of Gene Name/NCBI ID(s): 'Pgd'

Total of fusion sequences: 3 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Mus musculus	BE553870 ANNOTATION OF CHIMERA FUSION GenBank ID: BE553870 FASTA Head Gene (1) Alignment: Zfp280d Tail Gene (2) Alignment: Pgd Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 235469 9 + 72352336 72352374 0 0 protein-coding 110208 4 + 149149992 149150418 1 1 protein-coding 467 mm10 Updated: 2019-06-15 Owner: ChiTaRS	Zfp280d Q3TEI2 Q68FE8 Q8BT10 Q8R2V6 V9GWT3 V9GWV5 V9GWW1 V9GWZ2 V9GX57 V9GX97 V9GXC9 V9GXF6 V9GXP2 XM_017313343.1	10..45 100.0%	+ 9	Pgd Q3UAG2 Q91V28 Q91YT9 Q9DCD0 XM_017319917.1	41..467 98.9%	+ 4	1 0 0	intron-exon
2 Mus musculus	BU756960 ANNOTATION OF CHIMERA FUSION GenBank ID: BU756960 FASTA Head Gene (1) Alignment: Gm4541 Tail Gene (2) Alignment: Pgd Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100043595 7 + 21445753 21445776 1 1 110208 4 + 149150196 149150533 1 1 protein-coding 358 mm10 Updated: 2019-06-12 Owner: ChiTaRS	Gm4541 NR_033693.1	8..31 100.0%	+ 7	Pgd Q3UAG2 Q91V28 Q91YT9 Q9DCD0 NM_001081274.1	18..355 100.0%	+ 4	1 0 0	exon-exon
3 Mus musculus	BE913472 ANNOTATION OF CHIMERA FUSION GenBank ID: BE913472 FASTA Head Gene (1) Alignment: Pgd Tail Gene (2) Alignment: Bckdha Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 110208 4 - 149166016 149166638 2 1 protein-coding 12039 7 - 25631638 25641671 5 1 745 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Pgd Q3UAG2 Q91V28 Q91YT9 Q9DCD0 NM_001081274.1	4..123 97.5%	- 4	Bckdha A0A0U1RPK5 P50136 Q3U3J1 Q99L69 XM_006539486.3	118..708 97.1%	- 7	1 0 0	exon-exon

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