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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Pdzd2'

Total of fusion sequences: 49 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_177047.3
1..349
100.0%
-
5

XM_006520159.3
345..444
100.0%
-
15
1
0
0
intron-exon
2
Mus musculus

XR_389271.3
1..4443
100.0%
-
5

XM_006520159.3
4440..4486
100.0%
-
15
1
0
0
exon-intron
3
Mus musculus

XM_006520159.3
1..707
99.5%
+
15
Gm12671 7..755
99.7%
-
4
3
597
56
intron-exon
4
Mus musculus

XM_006520159.3
1..105
99.4%
+
15
Gm12671 12..803
99.5%
-
4
3
597
56
intron-exon
5
Mus musculus

XM_006520159.3
1..503
97.9%
+
15
Gm14760 4..695
98.2%
-
X
2
272
194
intron-exon
6
Mus musculus

XM_006520159.3
1..753
98.4%
+
15
Gm14760 30..870
98.5%
-
X
2
272
194
intron-exon
7
Mus musculus

XM_006520159.3
1..423
99.2%
+
15
Gm12671 6..457
99.2%
-
4
3
253
272
intron-exon
8
Mus musculus

XM_006540910.3
1..206
100.0%
-
7

XM_006520159.3
201..596
97.8%
+
15
2
76
0
exon-intron
9
Mus musculus

XM_006540910.3
1..206
100.0%
-
7

XM_006520159.3
201..518
100.0%
+
15
2
76
0
exon-intron
10
Mus musculus

XM_006520159.3
4..27
100.0%
-
15

XM_017316109.1
23..898
97.4%
+
2
1
0
0
intron-exon

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