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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Paxip1'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_024061.3
1..377
99.8%
+
7

XM_024446693.1
375..554
100.0%
-
7
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
XR_001753201.1
1..227
98.7%
-
18

XM_024446693.1
224..564
100.0%
-
7
1
0
0
exon-exon
3
Homo Sapiens

XM_024446693.1
20..229
99.1%
-
7

NM_000968.3
219..579
98.4%
-
15
1
0
0
exon-exon
4
Homo Sapiens

XM_024446693.1
23..232
99.6%
-
7

NM_000968.3
222..690
98.3%
-
15
1
0
0
exon-exon
5
Homo Sapiens

XM_024446693.1
20..229
99.1%
-
7

NM_000968.3
219..504
99.3%
-
15
1
0
0
exon-exon
6
Homo Sapiens

XM_024446693.1
10..292
97.2%
-
7
AL353595.1 274..306
100.0%
+
9
1
0
0
exon-intron
7
Homo Sapiens

XM_024446693.1
8..352
100.0%
-
7
PCGF5
Q86SE9

XM_011540271.3
338..365
100.0%
+
10
1
0
0
exon-intron
8
Homo Sapiens

NM_175063.5
46..136
100.0%
-
19

XM_024446694.1
124..174
96.1%
-
7
1
0
0
intron-intron
9
Homo Sapiens

NM_001354750.1
1..114
99.2%
+
11

XM_024446693.1
113..416
97.2%
+
7
1
0
0
intron-exon

T o p