Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'Papola'

Total of fusion sequences: 3 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Mus musculus	SplGraphs AK190027 ANNOTATION OF CHIMERA FUSION GenBank ID: AK190027 FASTA Head Gene (1) Alignment: Papola Tail Gene (2) Alignment: Grn Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 18789 12 + 107076566 107076784 NA NA protein-coding 14824 11 + 102298002 102298119 NA NA protein-coding NA mm9 Updated: 2012-09-25 Owner: ChiTaRS	Papola A0A0R4J244 E9PVN7 E9PWC8 E9PZR3 E9Q5Z1 E9QAN2 E9QAN5 E9QAY4 F6VTN8 F7AB38 F7CXD5 F7DC29 Q3V141 Q61183	1..219 99.6%	+ 12	Grn H3BJ90 H3BJE0 H3BLC9 P28798 Q3TVQ3 Q3TW77 Q3TWT4 Q3TX66 Q3U5Q6 Q3U8W3 Q3U9K2 Q3U9N4 Q3UAJ3 Q3UC19 Q3UD85 Q3UDD6 Q544Y8 Q9D2V3	216..333 100.0%	+ 11	1 0 0
Mus musculus	SplGraphs AI225371 ANNOTATION OF CHIMERA FUSION GenBank ID: AI225371 FASTA Head Gene (1) Alignment: Ptov1 Tail Gene (2) Alignment: Papola Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 84113 7 - 52120325 52121315 NA NA protein-coding 18789 12 + 107047832 107047915 NA NA protein-coding NA mm9 Updated: 2012-09-25 Owner: ChiTaRS	Ptov1 A0A140LHX3 A0A140LI15 A0A140LIC3 A0A140LJ23 A0A140LJ65 Q91VU8	1..524 97.7%	- 7	Papola A0A0R4J244 E9PVN7 E9PWC8 E9PZR3 E9Q5Z1 E9QAN2 E9QAN5 E9QAY4 F6VTN8 F7AB38 F7CXD5 F7DC29 Q3V141 Q61183	520..603 96.4%	+ 12	1 0 0
Mus musculus	BC038159 ANNOTATION OF CHIMERA FUSION GenBank ID: BC038159 FASTA Head Gene (1) Alignment: Ptov1 Tail Gene (2) Alignment: Papola Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 84113 7 - 52120325 52121315 NA NA protein-coding 18789 12 + 107047832 107047915 NA NA protein-coding NA mm9 Updated: 2012-09-25 Owner: ChiTaRS	Ptov1 A0A140LHX3 A0A140LI15 A0A140LIC3 A0A140LJ23 A0A140LJ65 Q91VU8	1..524 98.1%	- 7	Papola A0A0R4J244 E9PVN7 E9PWC8 E9PZR3 E9Q5Z1 E9QAN2 E9QAN5 E9QAY4 F6VTN8 F7AB38 F7CXD5 F7DC29 Q3V141 Q61183	520..603 100.0%	+ 12	1 0 0