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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PXN'

Total of fusion sequences: 12 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
PXN-AS1
NR_038924.1
7..150
98.0%
+
12

XM_024449108.1
137..228
100.0%
-
12
1
0
0
intron-exon
2
Homo Sapiens
1..254
99.7%
+
11
248..577
100.0%
-
12
1
0
0
exon-exon
3
Homo Sapiens

NM_013387.3
1..104
99.1%
-
22

XM_024449108.1
99..221
100.0%
+
12
1
0
0
exon-intron
4
Homo Sapiens
29..204
98.3%
+
22

XM_024449108.1
200..422
100.0%
+
12
1
0
0
intron-exon
5
Homo Sapiens

XM_024449108.1
1..370
100.0%
-
12
AJ006995.3 365..388
100.0%
-
21
1
0
0
exon-intron
6
Homo Sapiens
ZMYND19
Q96E35

NM_138462.2
5..168
100.0%
+
9

XM_024449108.1
161..336
99.5%
-
12
1
0
0
exon-exon
7
Homo Sapiens

XR_002958001.1
12..255
99.0%
-
17

XM_024449108.1
251..476
99.6%
+
12
1
0
0
exon-intron
8
Homo Sapiens

NM_182487.3
1..895
100.0%
+
9

XM_024449108.1
891..1713
99.9%
-
12
1
0
0
exon-exon
9
Homo Sapiens

XM_005255219.4
2..122
98.4%
-
16

XR_002957365.1
116..282
100.0%
+
12
1
0
0
exon-exon
10
Homo Sapiens

XR_001747931.1
11..313
99.1%
+
11

XM_024449108.1
310..476
100.0%
+
12
1
0
0
intron-exon

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