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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PTPN22'

Total of fusion sequences: 4 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_001193431.2
1..3489
100.0%
-
1
LOC107984526
XR_001749192.1
3487..3511
100.0%
-
12
1
0
0
exon-intron
2
Homo Sapiens

NM_001193431.2
1..3570
100.0%
-
1
LOC107984526
XR_001749192.1
3568..3592
100.0%
-
12
1
0
0
exon-intron
3
Homo Sapiens

NM_001193431.2
1..3582
100.0%
-
1
LOC107984526
XR_001749192.1
3580..3604
100.0%
-
12
1
0
0
exon-intron
4
Homo Sapiens
RNU4-2
NR_003137.2
1..134
100.0%
-
12

NM_015967.6
134..540
100.0%
-
1
1
0
0
exon-exon

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