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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PTPN21'

Total of fusion sequences: 15 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_005267287.3
3..25
100.0%
-
14

NM_019619.3
8..394
99.0%
+
10
2
2
0
intron-intron
2
Homo Sapiens

XM_005267287.3
1..26
96.2%
-
14

NM_019619.3
9..397
100.0%
+
10
2
2
0
intron-intron
3
Homo Sapiens

NM_000992.2
2..347
99.2%
-
3

XM_005267287.3
344..366
100.0%
+
14
1
0
0
exon-intron
4
Homo Sapiens

NM_000992.2
41..384
98.6%
-
3

XM_005267287.3
381..405
96.0%
+
14
1
0
0
exon-intron
5
Homo Sapiens

NM_000992.2
41..385
100.0%
-
3

XM_005267287.3
382..406
96.0%
+
14
1
0
0
exon-intron
6
Homo Sapiens

NM_001643.1
1..449
100.0%
-
1

XM_011536367.3
442..471
100.0%
+
14
1
0
0
exon-intron
7
Homo Sapiens

NM_001643.1
1..449
99.8%
-
1

XM_011536367.3
442..471
100.0%
+
14
1
0
0
exon-intron
8
Homo Sapiens

NM_001324301.1
7..255
100.0%
+
20

XM_005267287.3
248..273
100.0%
+
14
1
0
0
exon-intron
9
Mus musculus

NM_011877.2
1..29
100.0%
+
12

NR_125721.1
14..479
99.6%
+
9
1
0
0
exon-exon
10
Mus musculus

NM_011877.2
11..350
100.0%
-
12
Amd2
D3Z6H8

NM_007444.3
339..370
96.9%
-
10
1
0
0
exon-exon

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