Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PTPN2'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_005258125.4
1..130
100.0%
-
18

XR_001752036.2
127..454
100.0%
+
16
1
0
0
exon-exon
2
Homo Sapiens

XM_024451224.1
2..69
98.2%
+
18

XM_005258125.4
70..110
98.2%
+
18
1
0
0
intron-intronBREAKPOINTs
29099951
3
Homo Sapiens

XM_005258125.4
1..1601
100.0%
-
18
LOC107986154
XR_001741024.1
1600..1619
100.0%
+
3
1
0
0
exon-intron
4
Homo Sapiens

XM_005258125.4
1..35
97.2%
-
18

XM_017000084.1
24..270
98.4%
+
1
1
0
0
intron-exon
5
Homo Sapiens

XM_005258125.4
12..78
100.0%
-
18

XM_005268372.4
76..236
96.9%
+
5
1
0
0
intron-exon
6
Homo Sapiens

XM_005258125.4
1..242
96.3%
+
18

XR_001755406.2
11..675
99.6%
+
22
1
0
0
intron-intron
7
Homo Sapiens
1..323
99.7%
+
18
AC078880.3 303..324
100.0%
-
12
1
0
0
intron-intron
8
Homo Sapiens

ENST00000645191
1..81
95.3%
-
18

NM_001271977.1
20..111
99.0%
+
2
1
0
0
intron-exon
9
Homo Sapiens

XM_006711410.3
1..379
95.8%
+
1

XM_005258125.4
14..467
99.4%
+
18
1
0
0
intron-exon
10
Homo Sapiens
ANP32B
Q92688

NM_006401.2
29..291
100.0%
+
9

XM_011525705.3
267..295
100.0%
-
18
1
0
0
exon-intron

T o p