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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PTPN12'

Total of fusion sequences: 17 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XR_001744844.2
1..255
98.5%
+
7

NM_001017963.2
252..457
100.0%
-
14
1
0
0
exon-exonBREAKPOINTs
24564548
2
Homo Sapiens
ChimerDB
NM_001996.3
20..86
100.0%
-
22

XR_001744844.2
81..252
96.6%
-
7
1
0
0
exon-exon
3
Mus musculus
Hspe1-rs1
Q9JI95
1..525
99.1%
+
18

XM_017320731.1
295..534
95.9%
-
5
1
0
0
intron-intron
4
Homo Sapiens

XR_001744844.2
1..300
100.0%
-
7

NM_001008938.3
297..450
100.0%
+
11
3
191
0
exon-exon
5
Homo Sapiens

XR_001744844.2
1..299
99.7%
-
7

NM_001008938.3
296..519
100.0%
+
11
3
39
0
exon-exon
6
Homo Sapiens

XR_001744844.2
1..299
99.4%
-
7

NM_001008938.3
296..480
100.0%
+
11
3
39
0
exon-exon
7
Homo Sapiens
AFAP1L1
Q8TED9

NM_152406.3
1..767
100.0%
+
5

XR_001744844.2
760..785
100.0%
-
7
1
0
0
exon-intron
8
Homo Sapiens
AFAP1L1
Q8TED9

NM_152406.3
1..767
100.0%
+
5

XR_001744844.2
760..785
100.0%
-
7
1
0
0
exon-intron
9
Mus musculus

XM_017320731.1
19..511
99.2%
-
5

NM_009104.2
505..575
98.6%
-
12
1
0
0
exon-exon
10
Homo Sapiens

NM_002835.3
1..294
97.3%
+
7

NM_001174064.1
295..315
100.0%
-
8
1
0
0
exon-intron

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