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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PTPN12'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XR_001744844.2
1..255
98.5%
+
7

NM_001017963.2
252..457
100.0%
-
14
1
0
0
exon-exonBREAKPOINTs
24564548
Homo Sapiens ChimerDB
NM_001996.3
20..86
100.0%
-
22

XR_001744844.2
81..252
96.6%
-
7
1
0
0
exon-exon
Homo Sapiens
XR_001744844.2
1..300
100.0%
-
7

NM_001008938.3
297..450
100.0%
+
11
3
191
0
exon-exon
Homo Sapiens
XR_001744844.2
1..299
99.7%
-
7

NM_001008938.3
296..519
100.0%
+
11
3
39
0
exon-exon
Homo Sapiens
XR_001744844.2
1..299
99.4%
-
7

NM_001008938.3
296..480
100.0%
+
11
3
39
0
exon-exon
Homo Sapiens AFAP1L1
Q8TED9

NM_152406.3
1..767
100.0%
+
5

XR_001744844.2
760..785
100.0%
-
7
1
0
0
exon-intron
Homo Sapiens AFAP1L1
Q8TED9

NM_152406.3
1..767
100.0%
+
5

XR_001744844.2
760..785
100.0%
-
7
1
0
0
exon-intron
Homo Sapiens
NM_002835.3
1..294
97.3%
+
7

NM_001174064.1
295..315
100.0%
-
8
1
0
0
exon-intron
Homo Sapiens
NM_032883.2
21..40
100.0%
-
20

XR_001744844.2
40..771
100.0%
-
7
1
0
0
intron-exon
Homo Sapiens 19..416
98.0%
-
7
406..478
98.7%
-
6
1
0
0
exon-exon

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