Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Sense-ANTIsense

Read-through Chimeras Mass-spec Hits Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PTPN12'

Total of fusion sequences: 13 (from 1,350,599 parsed EST/mRNAs. Last update 2019-06-16)

Organism Fusion:
Graphical View,
Annotation, PPI
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed, iHOP
reference
Name(s)1 Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2 Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1789,10,1112,2513,14,151617
Homo SapiensSplGraphs 1..255
98.5%
+
7
252..457
100.0%
-
14
1
0
0
BREAKPOINTs
24564548
Homo Sapiens ChimerDB 20..86
100.0%
-
22
81..252
96.6%
-
7
1
0
0
Homo Sapiens 1..294
97.3%
+
7
295..315
100.0%
-
8
1
0
0
Homo Sapiens 19..416
98.0%
-
7
406..478
98.7%
-
6
1
0
0
Homo Sapiens 30..94
95.4%
+
3
84..454
97.1%
-
7
1
0
0
Homo Sapiens 40..771
100.0%
-
7
RP11-12J10.3 759..780
100.0%
-
10
1
0
0
Homo Sapiens 1..299
99.7%
-
7
296..519
100.0%
+
11
3
39
0
Homo Sapiens 1..300
100.0%
-
7
297..450
100.0%
+
11
3
191
0
Homo Sapiens 1..299
99.4%
-
7
296..480
100.0%
+
11
3
39
0
Homo Sapiens AFAP1L1
Q8TED9
1..767
100.0%
+
5
760..785
100.0%
-
7
1
0
0