Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PSMA4'

Total of fusion sequences: 7 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_001330676.1
2..311
100.0%
+
15

NM_001042466.2
304..820
98.0%
-
10
1
0
0
exon-exon
2
Homo Sapiens

XM_017012842.2
1..33
100.0%
+
7

NM_001330676.1
17..380
97.3%
-
15
1
0
0
intron-exon
3
Homo Sapiens

XM_017025615.1
12..35
100.0%
-
18

NM_002789.5
32..383
99.2%
-
15
1
0
0
intron-exon
4
Homo Sapiens

NM_002789.5
28..81
100.0%
-
15

NM_002789.5
75..99
100.0%
-
15
1
0
0
exon-exon
5
Homo Sapiens

XM_017025529.2
2..276
99.0%
-
18

NM_001330676.1
267..622
98.9%
+
15
1
0
0
exon-exon
6
Homo Sapiens

NR_147053.2
10..144
95.5%
-
11

NM_002789.5
17..724
99.7%
-
15
1
0
0
intron-exon
7
Homo Sapiens

NM_001330676.1
7..383
99.8%
+
15

ENST00000486632
382..434
98.0%
+
1
1
0
0
exon-intron

T O P