Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec Hits Read-through Chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PRRG1'

Total of fusion sequences: 6 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Hi-C,
RNAseq,
Mass-spec
evidences
Fusion type,
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,151617
Homo SapiensSplGraphs 1..200
97.5%
+
X
196..305
97.3%
+
X
1
0
0
Homo SapiensSplGraphs 1..278
100.0%
+
X
279..578
100.0%
+
X
1
0
0
Homo Sapiens 51..126
96.9%
-
4
65..135
95.6%
-
X
1
0
0
Homo Sapiens FAM178B
Q8IXR5
1..776
97.2%
-
2
328..2125
99.9%
+
X
0
1253
65535
Homo Sapiens FAM178B
Q8IXR5
9..341
100.0%
-
2
339..889
98.4%
+
X
0
1253
65535
Homo Sapiens 1..278
100.0%
+
X
279..963
100.0%
+
X
1
0
0