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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PRPF8'

Total of fusion sequences: 13 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_014624.3
1..234
100.0%
-
1

XM_024450537.1
231..729
99.8%
-
17
0
2077
200
exon-exon
2
Homo Sapiens
ChimerDB RNASEK-C17orf49
H0YIS7

NR_037717.1
18..576
99.7%
-
17

XM_024450537.1
573..727
100.0%
+
17
1
0
0
exon-exon
3
Homo Sapiens
ChimerDB
XM_024450537.1
1..183
100.0%
-
17

NM_001165414.1
178..765
97.9%
+
11
1
0
0
exon-exon
4
Homo Sapiens
ChimerDB
XM_024450537.1
2..209
100.0%
-
17

NM_000998.4
203..547
99.8%
+
2
1
0
0
exon-exon
5
Homo Sapiens
SplGraphs
XM_024450537.1
1..176
100.0%
-
17

XM_024450537.1
172..586
99.8%
-
17
0
4
24840
exon-exon
6
Homo Sapiens

XM_024450537.1
13..97
100.0%
+
17

XM_024450537.1
87..450
95.1%
-
17
0
5069
8962
exon-exon
7
Homo Sapiens

XM_024450537.1
1..135
100.0%
+
17

XM_024450537.1
132..500
99.8%
+
17
0
4
24840
exon-exon
8
Homo Sapiens

NM_014624.3
1..204
99.0%
+
1

XM_024450537.1
186..542
97.7%
+
17
0
2077
200
exon-exon
9
Homo Sapiens

XM_024450537.1
16..194
98.9%
-
17
RSPH9
Q9H1X1

XR_926099.2
189..259
95.5%
+
6
1
0
0
exon-intron
10
Homo Sapiens

XM_024450537.1
1..218
99.1%
+
17

NM_015138.4
216..246
100.0%
-
15
1
0
0
exon-intron

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