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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PRPF6'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001256447.1
14..201
99.0%
-
X
PRPF6
O94906

NM_012469.3
195..301
98.2%
+
20
1
0
0
exon-exon
2
Homo Sapiens
PRPF6
O94906
21..41
100.0%
+
20
27..369
99.5%
-
14
1
0
0
intron-intron
3
Homo Sapiens
LOC105378470
NR_134330.1
1..36
100.0%
-
10
PRPF6
O94906

NM_012469.3
32..481
100.0%
-
20
1
0
0
intron-exon
4
Homo Sapiens

XM_006720524.1
1..31
96.8%
-
15
PRPF6
O94906

NM_012469.3
28..429
98.1%
-
20
1
0
0
intron-exon
5
Homo Sapiens
PRPF6
O94906
1..78
96.2%
-
20
59..79
100.0%
-
20
1
0
0
intron-intron
6
Homo Sapiens

XR_001745616.2
4..234
100.0%
-
8
PRPF6
O94906

NM_012469.3
232..366
100.0%
+
20
1
0
0
exon-intron
7
Homo Sapiens

XM_011513115.3
19..314
95.5%
+
3
PRPF6
O94906

NM_012469.3
127..756
98.0%
-
20
1
0
0
exon-intron
8
Homo Sapiens
PRPF6
O94906

NM_012469.3
1..348
100.0%
-
20
PRPF6
O94906

NM_012469.3
332..444
99.1%
-
20
1
0
0
exon-exon
9
Homo Sapiens

XM_005250978.3
7..72
97.0%
-
8
PRPF6
O94906

NM_012469.3
56..186
97.8%
+
20
1
0
0
intron-exon

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