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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PRKDC'

Total of fusion sequences: 21 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_024449461.1
1..151
100.0%
-
14

NM_006904.6
152..2763
99.9%
-
8
1
0
0
intron-intron
2
Homo Sapiens
ChimerDB
XM_024449461.1
1..151
95.7%
-
14

NM_006904.6
152..807
98.7%
-
8
1
0
0
intron-intron
3
Homo Sapiens
ChimerDB
NM_006904.6
1..68
95.6%
-
8

NM_001270447.1
62..170
100.0%
+
17
1
0
0
intron-exon
4
Homo Sapiens
ChimerDB
NM_006904.6
1..239
99.6%
-
8

XM_017026864.1
237..476
98.8%
-
19
1
0
0
exon-exon
5
Homo Sapiens
SplGraphs
NM_006904.6
1..337
100.0%
-
8

NM_018976.4
333..425
100.0%
-
12
1
0
0
intron-exon
6
Homo Sapiens

NM_006904.6
8..123
100.0%
+
8

NM_006904.6
120..475
99.5%
-
8
0
65535
65535
exon-exon
7
Homo Sapiens

NM_006904.6
1..358
99.2%
+
8

NM_006904.6
342..408
100.0%
-
8
0
65535
65535
exon-exon
8
Homo Sapiens

NM_006904.6
1..32
96.9%
-
8

NM_001321904.1
9..250
100.0%
+
2
2
1
0
exon-exon
9
Homo Sapiens

NM_001321904.1
8..249
100.0%
-
2

NM_006904.6
226..258
97.0%
+
8
2
1
0
exon-intron
10
Homo Sapiens

NM_023936.1
124..164
100.0%
-
16

NM_006904.6
165..367
98.6%
+
8
1
0
0
exon-exon

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