Result for the search of Gene Name/NCBI ID(s): 'PRKCB'

Total of fusion sequences: 17 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs BM710854 ANNOTATION OF CHIMERA FUSION GenBank ID: BM710854 FASTA Head Gene (1) Alignment: GPAM | OMIM: 602395 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 57678 10 - 112155864 112157382 4 1 protein-coding 5579 16 + 24219960 24220055 1 1 tumor suppressor, protein-coding 419 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Acyltransferase (PF01553, IPR002123, SM00563) 134 203 355 9.6e-26 76.200 Acyltransferase Updated: 2019-02-21 Owner: ChiTaRS	GPAM Q5VW52 Q8N1G6 Q9HCL2 XM_024448089.1	1..324 100.0%	- 10	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	324..419 100.0%	+ 16	1 0 0	exon-exon
2 Homo Sapiens	SplGraphs DA481806 ANNOTATION OF CHIMERA FUSION GenBank ID: DA481806 FASTA Head Gene (1) Alignment: PTRH2 | OMIM: 608625 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51651 17 - 59707369 59707411 3 1 protein-coding 5579 16 + 24154682 24185174 8 1 tumor suppressor, protein-coding 573 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pkinase (PF00069, IPR000719) 264 86 330 8.5e-60 188.400 Protein kinase domain Pkinase_C (PF00433, IPR017892) 46 356 391 9.9e-09 22.100 Protein kinase C terminal domain Updated: 2019-02-21 Owner: ChiTaRS	PTRH2 J3KQ48 Q9Y3E5 NM_001015509.2	1..43 100.0%	- 17	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	40..573 100.0%	+ 16	1 0 0	exon-exon
3 Homo Sapiens	SplGraphs AA643921 ANNOTATION OF CHIMERA FUSION GenBank ID: AA643921 FASTA Head Gene (1) Alignment: PRKCB | OMIM: 176970 Tail Gene (2) Alignment: LEMD2 | OMIM: 616312 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5579 16 + 24035499 24092891 6 1 tumor suppressor, protein-coding 221496 6 - 33771398 33771499 9 1 protein-coding 251 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to C1_1 (PF00130, IPR002219, SM00109) 53 37 89 1e-20 59.700 Phorbol esters/diacylglycerol binding domain (C1 domain) C2 (PF00168, IPR000008, SM00239) 103 171 218 1.9e-08 20.800 C2 domain Updated: 2019-02-20 Owner: ChiTaRS	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	1..150 100.0%	+ 16	LEMD2 A0A024RCZ1 A0A220T1R7 D6R958 D6RBV0 H0Y8H8 H0Y9B7 H7C2Z0 Q8NC56 NM_001348709.1	141..242 100.0%	- 6	1 0 0	exon-exon
4 Homo Sapiens	SplGraphs DA717960 ANNOTATION OF CHIMERA FUSION GenBank ID: DA717960 FASTA Head Gene (1) Alignment: PRPS1 | OMIM: 311850 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5631 X + 107628515 107628568 1 1 oncogene, protein-coding 5579 16 + 23836286 24092891 17 1 tumor suppressor, protein-coding 573 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to C1_1 (PF00130, IPR002219, SM00109) 53 21 72 2.1e-19 55.500 Phorbol esters/diacylglycerol binding domain (C1 domain) C2 (PF00168, IPR000008, SM00239) 103 154 260 2.1e-30 91.400 C2 domain Pkinase (PF00069, IPR000719) 264 325 583 6.9e-65 205.100 Protein kinase domain Pkinase_C (PF00433, IPR017892) 46 609 644 1.8e-08 21.300 Protein kinase C terminal domain Updated: 2019-02-21 Owner: ChiTaRS	PRPS1 A0A2R8Y7H4 B1ALA7 B1ALA9 B7ZB02 P60891 Q15244 NM_002764.3	1..54 100.0%	+ X	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	54..573 100.0%	+ 16	1 0 0	exon-exon
5 Homo Sapiens	BP356442 ANNOTATION OF CHIMERA FUSION GenBank ID: BP356442 FASTA Head Gene (1) Alignment: G3BP1 | OMIM: 608431 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10146 5 + 151771954 151794249 5 1 protein-coding 5579 16 + 23843572 23843601 0 0 tumor suppressor, protein-coding 583 hg38 Updated: 2019-04-02 Owner: ChiTaRS	G3BP1 E5RH00 E5RH42 E5RI46 E5RIF8 E5RIZ6 E5RJU8 Q13283 Q32P45 Q5U0Q1 Q6FI03 NM_005754.2	1..575 99.9%	+ 5	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_002738.6	558..583 100.0%	+ 16	2 1 0	exon-intron
6 Homo Sapiens	BP284324 ANNOTATION OF CHIMERA FUSION GenBank ID: BP284324 FASTA Head Gene (1) Alignment: G3BP1 | OMIM: 608431 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10146 5 + 151771954 151794249 5 1 protein-coding 5579 16 + 23843572 23843602 0 0 tumor suppressor, protein-coding 587 hg38 Updated: 2019-03-03 Owner: ChiTaRS	G3BP1 E5RH00 E5RH42 E5RI46 E5RIF8 E5RIZ6 E5RJU8 Q13283 Q32P45 Q5U0Q1 Q6FI03 NM_005754.2	1..575 99.7%	+ 5	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_002738.6	558..584 100.0%	+ 16	2 1 0	exon-intron
7 Homo Sapiens	FN167744 ANNOTATION OF CHIMERA FUSION GenBank ID: FN167744 FASTA Head Gene (1) Alignment: CLIC6 | OMIM: 615321 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 54102 21 - 34717900 34717995 3 0 protein-coding 5579 16 + 23918351 23918370 1 0 tumor suppressor, protein-coding 95 hg38 Updated: 2018-08-30 Owner: ChiTaRS	CLIC6 Q96NY7	1..93 99.0%	- 21	PRKCB H3BV73 I3L148 I3L1Z0 P05771	75..94 100.0%	+ 16	1 0 0	intron-intron
8 Homo Sapiens	BF525883 ANNOTATION OF CHIMERA FUSION GenBank ID: BF525883 FASTA Head Gene (1) Alignment: PPIB | OMIM: 123841 Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5479 15 - 64155817 64156145 1 1 protein-coding 5579 16 + 23905043 23905069 15 0 tumor suppressor, protein-coding 671 hg38 Updated: 2019-01-10 Owner: ChiTaRS	PPIB P23284 V9HWC6 NM_000942.4	1..330 99.1%	- 15	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	313..339 100.0%	+ 16	1 0 0	exon-intron
9 Homo Sapiens	DB116073 ANNOTATION OF CHIMERA FUSION GenBank ID: DB116073 FASTA Head Gene (1) Alignment: CIAO2A Tail Gene (2) Alignment: PRKCB | OMIM: 176970 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 84191 15 - 64088685 64093897 6 1 protein-coding 5579 16 + 24154683 24154818 8 1 tumor suppressor, protein-coding 556 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pkinase (PF00069, IPR000719) 264 139 384 1e-59 188.100 Protein kinase domain Pkinase_C (PF00433, IPR017892) 46 410 445 1.2e-08 21.900 Protein kinase C terminal domain Updated: 2019-02-21 Owner: ChiTaRS	CIAO2A H0YKV4 Q9H5X1 NR_110310.1	3..423 99.6%	- 15	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	421..556 100.0%	+ 16	1 0 0	exon-exon
10 Homo Sapiens	BI030492 ANNOTATION OF CHIMERA FUSION GenBank ID: BI030492 FASTA Head Gene (1) Alignment: PRKCB | OMIM: 176970 Tail Gene (2) Alignment: BCL11A | OMIM: 606557 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5579 16 - 23884358 23884551 2 0 tumor suppressor, protein-coding 53335 2 + 60452394 60452481 5 1 oncogene, protein-coding 274 hg38 Updated: 2019-02-21 Owner: ChiTaRS	PRKCB H3BV73 I3L148 I3L1Z0 P05771 NM_212535.2	1..194 100.0%	- 16	BCL11A A0A0J9YXG2 A0A0J9YY13 A0A0J9YYJ9 A0A2R8Y2E8 A0A2R8Y7B0 A0A2R8Y7W4 A0A2R8YCR5 A0A2R8YDS7 A0A2R8YDW6 A0A2R8YEK1 A0A2R8YGT9 A0A2R8YHH4 A0A2U3TZJ5 D6W5D9 D9YZV9 I3PG23 Q53TE8 Q53TS1 Q9H165 NM_018014.3	183..270 100.0%	+ 2	1 0 0	intron-exon

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