Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'PRKAB2'

Total of fusion sequences: 4 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	ChimerDB DA824273 ANNOTATION OF CHIMERA FUSION GenBank ID: DA824273 FASTA Head Gene (1) Alignment: PRKAB2 | OMIM: 602741 Tail Gene (2) Alignment: RFWD2 | OMIM: 608067 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5565 1 - 146638424 146644053 NA NA protein-coding 64326 1 - 176118142 176118212 NA NA tumor suppressor NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to AMPK1_CBM (PF16561, IPR032640) 85 100 184 7.4e-33 99.000 Glycogen recognition site of AMP-activated protein kinase IncA (PF04156, IPR007285) 190 159 210 0.0032 3.400 IncA protein WD40 (PF00400, IPR001680, SM00320) 38 315 357 0.006 3.900 WD domain, G-beta repeat ANAPC4_WD40 (PF12894, IPR024977) 92 424 474 0.00014 8.500 Anaphase-promoting complex subunit 4 WD40 domain WD40_like (PF17005, IPR031544) 301 464 598 1.9e-07 16.800 WD40-like domain Updated: 2012-12-12 Owner: ChiTaRS	PRKAB2 O43741 X5D2S2 X5D2Z8 X5D9J1	1..488 99.8%	- 1	RFWD2 E9PJB5 E9PMW8 H0Y339 H0Y340 H0YF49 Q05CT6 Q8NHY2 X5D2S9 X5D7N8 X5D7W8 X5D9B8 X5DNY7 X5DR91 X5DRD4	486..556 100.0%	- 1	1 0 0
Homo Sapiens	ChimerDB DA947002 ANNOTATION OF CHIMERA FUSION GenBank ID: DA947002 FASTA Head Gene (1) Alignment: RAB5A | OMIM: 179512 Tail Gene (2) Alignment: PRKAB2 | OMIM: 602741 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5868 3 + 19988589 19988773 NA NA oncogene, protein-coding 5565 1 - 146628365 146628469 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	RAB5A A0A024R2K1 C9J3X8 F8WCY6 F8WD79 P20339	1..186 97.9%	+ 3	PRKAB2 O43741 X5D2S2 X5D2Z8 X5D9J1	187..291 99.1%	- 1	1 0 0
Homo Sapiens	AA836812 ANNOTATION OF CHIMERA FUSION GenBank ID: AA836812 FASTA Head Gene (1) Alignment: ANO6 | OMIM: 608663 Tail Gene (2) Alignment: PRKAB2 | OMIM: 602741 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 196527 12 - 45825749 45826129 NA NA protein-coding 5565 1 + 146626712 146626773 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Anoct_dimer (PF16178, IPR032394) 227 128 351 2.5e-77 245.700 Dimerisation domain of Ca+-activated chloride-channel, anoctamin Anoctamin (PF04547, IPR007632) 435 354 937 1.7e-159 517.200 Calcium-activated chloride channel Updated: 2012-12-12 Owner: ChiTaRS	ANO6 F8VX71 Q4KMQ2	1..381 100.0%	- 12	PRKAB2 O43741 X5D2S2 X5D2Z8 X5D9J1	382..443 100.0%	+ 1	1 0 0
Homo Sapiens	BX482434 ANNOTATION OF CHIMERA FUSION GenBank ID: BX482434 FASTA Head Gene (1) Alignment: PRKAB2 | OMIM: 602741 Tail Gene (2) Alignment: ERG | OMIM: 165080 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5565 1 - 146636898 146636957 NA NA protein-coding 2078 21 - 39768753 39769274 NA NA oncogene NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	PRKAB2 O43741 X5D2S2 X5D2Z8 X5D9J1	9..68 100.0%	- 1	ERG A0A088AWP2 A0A0C4DG41 A8MX39 A8MZ24 B2Y833 B5MDW0 P11308 Q16031 Q7LDT7	63..584 99.9%	- 21	1 0 0