Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PPP2R1B'

Total of fusion sequences: 10 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_002716.4
18..114
99.0%
-
11

NM_005008.3
108..366
95.6%
-
22
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_000353.2
1..339
99.2%
-
16

NM_002716.4
338..781
97.2%
-
11
1
0
0
exon-exon
3
Homo Sapiens

XM_017017417.1
1..2262
100.0%
+
11

NM_181699.2
594..9622
100.0%
+
11
1
0
0
exon-intron
4
Homo Sapiens

XM_024448598.1
12..812
99.4%
-
11
LINC02553 805..824
100.0%
-
11
1
0
0
exon-intron
5
Homo Sapiens

XM_024448598.1
1..167
95.3%
-
11

XR_001747198.1
115..211
95.4%
+
10
1
0
0
intron-intron
6
Homo Sapiens

NM_005558.3
1..62
100.0%
-
1

NM_002716.4
50..596
99.3%
-
11
1
0
0
exon-exon
7
Homo Sapiens

XM_024447876.1
15..48
100.0%
-
10

NM_002716.4
44..391
100.0%
+
11
1
0
0
intron-exon
8
Homo Sapiens

XR_001751953.2
1..227
97.4%
+
16

XM_024448598.1
208..288
96.3%
-
11
1
0
0
intron-intron
9
Homo Sapiens

XM_005263383.3
5..75
97.2%
-
4

XM_024448598.1
19..274
95.4%
-
11
1
0
0
intron-intron
10
Homo Sapiens

XM_024448598.1
1..22
100.0%
+
11
GAREM2
Q75VX8

XM_011532567.3
10..656
98.3%
+
2
0
0
0
intron-intron

T o p