Result for the search of Gene Name/NCBI ID(s): 'PPM1A'

Total of fusion sequences: 7 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	ChimerDB BG485165 ANNOTATION OF CHIMERA FUSION GenBank ID: BG485165 FASTA Head Gene (1) Alignment: NEAT1 | OMIM: 612769 Tail Gene (2) Alignment: PPM1A | OMIM: 606108 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 283131 11 + 65425473 65425981 1 1 ncRNA 5494 14 + 60287906 60288119 1 1 tumor suppressor, protein-coding 712 hg38 Updated: 2019-02-21 Owner: ChiTaRS	NEAT1 NR_028272.1	1..509 100.0%	+ 11	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 NM_177951.2	503..712 98.1%	+ 14	1 0 0	exon-exon
2 Homo Sapiens	BF904341 ANNOTATION OF CHIMERA FUSION GenBank ID: BF904341 FASTA Head Gene (1) Alignment: MYO9B | OMIM: 602129 Tail Gene (2) Alignment: PPM1A | OMIM: 606108 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4650 19 - 17097505 17097646 1 0 protein-coding 5494 14 - 60282943 60283033 5 1 tumor suppressor, protein-coding 233 hg38 Updated: 2019-02-20 Owner: ChiTaRS	MYO9B M0QXP0 M0QXX1 M0QZY4 M0R0P8 M0R240 M0R2J3 M0R300 M0R332 Q13459 Q4LE74 Q8WVD2 NM_004145.3	1..142 95.1%	- 19	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 XM_017021382.1	143..233 99.0%	- 14	1 0 0	intron-exon
3 Homo Sapiens	CN308615 ANNOTATION OF CHIMERA FUSION GenBank ID: CN308615 FASTA Head Gene (1) Alignment: PKM | OMIM: 179050 Tail Gene (2) Alignment: PPM1A | OMIM: 606108 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5315 15 - 72219093 72231163 3 1 oncogene, protein-coding 5494 14 + 60292922 60293334 1 1 tumor suppressor, protein-coding 466 hg38 Updated: 2019-03-03 Owner: ChiTaRS	PKM A0A024R5Z9 A0A024R609 B4DNK4 H3BN34 H3BQ34 H3BQZ3 H3BR70 H3BT25 H3BTJ2 H3BTN5 H3BU13 H3BUW1 P14618 Q504U3 Q8WUW7 V9HWB8 NM_001206796.2	1..66 100.0%	- 15	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 XM_017021382.1	54..466 99.8%	+ 14	1 0 0	exon-exon
4 Homo Sapiens	BI491739 ANNOTATION OF CHIMERA FUSION GenBank ID: BI491739 FASTA Head Gene (1) Alignment: HMGA2 | OMIM: 600698 Tail Gene (2) Alignment: PPM1A | OMIM: 606108 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8091 12 + 65838597 65839015 3 0 oncogene, protein-coding 5494 14 - 60288419 60288555 1 1 tumor suppressor, protein-coding 174 hg38 Updated: 2019-01-31 Owner: ChiTaRS	HMGA2 F5H2A4 F5H2U8 F5H6H0 H0YFY4 P52926 Q1M183 Q8IZX8 NM_001300918.1	1..29 100.0%	+ 12	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 NM_177951.2	22..158 100.0%	- 14	1 0 0	intron-exon
5 Homo Sapiens	FN176101 ANNOTATION OF CHIMERA FUSION GenBank ID: FN176101 FASTA Head Gene (1) Alignment: RP11-624L4.1 Tail Gene (2) Alignment: PPM1A | OMIM: 606108 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4294901456 15 + 39191615 39191634 0 0 5494 14 + 60292670 60292737 1 1 tumor suppressor, protein-coding 70 hg38 Updated: 2019-02-08 Owner: ChiTaRS	RP11-624L4.1	1..20 100.0%	+ 15	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 XM_017021382.1	3..65 98.4%	+ 14	1 0 0	intron-exon
6 Homo Sapiens	FN112102 ANNOTATION OF CHIMERA FUSION GenBank ID: FN112102 FASTA Head Gene (1) Alignment: PPM1A | OMIM: 606108 Tail Gene (2) Alignment: GPNMB | OMIM: 604368 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5494 14 - 60293278 60293311 1 1 tumor suppressor, protein-coding 10457 7 + 23274698 23274784 1 1 oncogene, protein-coding 99 hg38 Updated: 2019-03-03 Owner: ChiTaRS	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 XM_017021382.1	1..33 97.0%	- 14	GPNMB A0A024RA55 A0A3B3ISS6 Q14956 Q8IXJ5 Q96F58 XM_017011677.2	14..99 96.5%	+ 7	1 0 0	exon-exon
7 Homo Sapiens	BF435544 ANNOTATION OF CHIMERA FUSION GenBank ID: BF435544 FASTA Head Gene (1) Alignment: MAP4K4 | OMIM: 604666 Tail Gene (2) Alignment: PPM1A | OMIM: 606108 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9448 2 - 101891909 101892034 33 1 protein-coding 5494 14 - 60297746 60298088 1 1 tumor suppressor, protein-coding 452 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF1777 (PF08648, IPR013957) 171 44 138 0.036 0.500 Protein of unknown function (DUF1777) Pkinase (PF00069, IPR000719) 264 151 415 1.3e-65 207.400 Protein kinase domain DUF2477 (PF10631, IPR018904) 141 948 1020 2.5e-05 11.200 Protein of unknown function (DUF2477) CNH (PF00780, IPR001180, SM00036) 275 1090 1370 5.6e-62 195.900 CNH domain Updated: 2019-02-20 Owner: ChiTaRS	MAP4K4 A0A0D9SEY1 A0A0D9SG62 C9J840 E7EN19 E7ENQ1 E7ETN6 E7EX83 G3XAA2 G5E948 H7C0P6 H7C360 H7C3Z6 O95819 Q53TW0 Q53TX8 Q5MD60 V9HWH3 XM_005264048.2	1..122 97.6%	- 2	PPM1A A0A024R6A5 B5BUD5 E9PJN3 E9PKB5 E9PL75 E9PNE1 E9PP44 L8EAT3 P35813 XM_017021382.1	110..452 99.2%	- 14	1 0 0	exon-exon

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