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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PPFIBP1'

Total of fusion sequences: 9 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_005516.5
51..340
99.0%
+
6

XM_024449232.1
336..514
100.0%
+
12
1
0
0
exon-exonHS440
2
Homo Sapiens

XM_017020056.2
1..733
99.9%
+
12

NM_004304.4
732..2488
99.8%
-
2
2
0
7
exon-exonBREAKPOINTs
21430068
21430068
23957430
3
Homo Sapiens

XM_017020056.2
2..734
99.9%
+
12

NM_004304.4
733..2482
99.8%
-
2
2
0
7
exon-exonBREAKPOINTs
21430068
21430068
23957430
4
Homo Sapiens

NM_001330463.1
1..4429
100.0%
-
2

XM_017020056.2
4426..4446
100.0%
+
12
1
0
0
exon-intron
5
Homo Sapiens

NM_001330459.1
1..4086
100.0%
-
2

XM_017020056.2
4083..4103
100.0%
+
12
1
0
0
exon-intron
6
Homo Sapiens

XM_017020056.2
1..231
99.6%
-
12

NM_006738.5
230..1494
100.0%
+
15
1
0
0
intron-exon
7
Homo Sapiens

NM_001042466.2
1..602
99.9%
-
10

XM_017020056.2
590..615
96.2%
+
12
1
0
0
exon-intron
8
Homo Sapiens
LOC107984461
XR_001749448.1
16..71
100.0%
-
12

XM_024449232.1
68..129
98.4%
+
12
1
0
0
intron-exon
9
Homo Sapiens

NM_000594.3
46..689
99.4%
+
6

XM_017020056.2
686..719
97.0%
-
12
1
0
0
exon-intron

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