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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PLXNB3'

Total of fusion sequences: 5 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB GPR37L1
O60883

NM_004767.4
12..137
100.0%
-
1

NM_001163257.1
136..645
96.7%
-
X
1
0
0
exon-exon
2
Mus musculus

NM_012048.2
13..3488
99.6%
-
13

XM_006527779.1
2946..3517
95.0%
+
X
1
0
0
exon-intron
3
Homo Sapiens
GPR37L1
O60883

NM_004767.4
12..137
100.0%
-
1

NM_001163257.1
136..238
99.1%
-
X
1
0
0
exon-exon
4
Mus musculus
Gm40612
XR_871508.1
1..28
100.0%
+
10

XM_006527779.1
8..587
99.4%
-
X
1
0
0
intron-exon
5
Homo Sapiens

NM_001163257.1
33..118
100.0%
+
X

NM_001353688.1
114..168
100.0%
+
21
1
0
0
exon-intron

T o p