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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PKNOX2'

Total of fusion sequences: 4 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
FTH1P12 1..914
95.2%
-
9

XM_024448646.1
901..922
100.0%
-
11
1
0
0
exon-intron
2
Homo Sapiens

XM_017029744.1
1..79
96.3%
+
X

XM_024448646.1
32..109
97.5%
-
11
1
0
0
intron-intron
3
Homo Sapiens
NT5C1B-RDH14
C9J2C7

NM_001199104.1
1..488
98.8%
-
2

XM_024448646.1
483..505
95.7%
+
11
1
0
0
intron-intron
4
Homo Sapiens

XM_024448643.1
1..158
99.4%
+
11

XR_001738876.2
156..454
98.0%
+
2
1
0
0
intron-exon

T o p