Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PKN1'

Total of fusion sequences: 11 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NR_146425.1
1..50
100.0%
+
2

NM_002741.3
51..566
99.9%
+
19
1
0
0
exon-exon
2
Homo Sapiens

NM_004009.3
1..76
95.4%
+
X

XM_011528128.1
10..622
99.4%
-
19
1
0
0
intron-exon
3
Homo Sapiens

NM_004009.3
1..76
95.4%
+
X

XM_011528128.1
10..479
95.1%
-
19
1
0
0
intron-exon
4
Homo Sapiens

NM_004009.3
1..76
95.4%
+
X

XM_011528128.1
10..512
96.3%
-
19
1
0
0
intron-exon
5
Homo Sapiens
LOC107985305
XR_001753953.1
4..34
100.0%
-
19

XM_011528128.1
34..653
99.6%
-
19
1
0
0
intron-exon
6
Sus Scrofa
LOC100515528 1..715
99.9%
-
2
715..1885
100.0%
+
2
1
0
0
intron-intron
7
Homo Sapiens

NR_144434.1
1..34
100.0%
-
6

XM_011528128.1
10..105
95.9%
+
19
1
0
0
exon-intron
8
Homo Sapiens

XM_017022990.2
26..299
96.4%
+
16

NM_002741.3
293..437
98.0%
-
19
1
0
0
intron-exon
9
Mus musculus

XR_001778448.1
80..586
96.0%
-
8
Gm21949
A0A088MLT8

NM_001113419.2
584..617
100.0%
-
3
1
0
0
exon-intron
10
Homo Sapiens

XM_011528128.1
12..42
100.0%
-
19

NM_003492.2
38..312
99.3%
-
X
1
0
0
intron-exon

T o p