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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PKN1'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NR_146425.1
1..50
100.0%
+
2

NM_002741.3
51..566
99.9%
+
19
1
0
0
exon-exon
Homo Sapiens
NM_004009.3
1..76
95.4%
+
X

XM_011528128.1
10..622
99.4%
-
19
1
0
0
intron-exon
Homo Sapiens
NM_004009.3
1..76
95.4%
+
X

XM_011528128.1
10..479
95.1%
-
19
1
0
0
intron-exon
Homo Sapiens
NM_004009.3
1..76
95.4%
+
X

XM_011528128.1
10..512
96.3%
-
19
1
0
0
intron-exon
Homo Sapiens LOC107985305
XR_001753953.1
4..34
100.0%
-
19

XM_011528128.1
34..653
99.6%
-
19
1
0
0
intron-exon
Homo Sapiens
NR_144434.1
1..34
100.0%
-
6

XM_011528128.1
10..105
95.9%
+
19
1
0
0
exon-intron
Homo Sapiens
XM_017022990.2
26..299
96.4%
+
16

NM_002741.3
293..437
98.0%
-
19
1
0
0
intron-exon
Homo Sapiens
XM_011528128.1
12..42
100.0%
-
19

NM_003492.2
38..312
99.3%
-
X
1
0
0
intron-exon

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