Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PKMYT1'

Total of fusion sequences: 6 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XR_002957468.1
10..525
100.0%
-
13

NM_001258451.1
526..1315
100.0%
-
16
1
0
0
exon-exon
Homo Sapiens ChimerDB
XR_002957468.1
2..516
100.0%
-
13

XM_011522734.3
517..744
97.8%
-
16
1
0
0
exon-exon
Homo Sapiens
NM_001258450.1
1..2209
100.0%
-
16

NM_003550.2
2204..2225
95.5%
+
7
1
0
0
exon-intron
Homo Sapiens
NM_001324118.1
1..350
98.1%
+
16

XM_011522734.3
351..508
98.1%
+
16
1
0
0
exon-exon
Homo Sapiens
XM_024450490.1
1..681
98.9%
-
16

XM_005265950.2
677..700
100.0%
+
5
1
0
0
exon-intron
Homo Sapiens
XM_011522734.3
2..54
100.0%
+
16

XM_011522734.3
49..1960
99.7%
-
16
1
0
0
exon-exon

T o p