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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PITPNC1'

Total of fusion sequences: 21 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_006715921.4
1..4044
99.7%
+
7

XM_017024443.1
3985..4312
97.2%
-
17
1
0
0
exon-intron
2
Homo Sapiens

XM_017024444.1
166..266
96.1%
+
17

XM_011524520.2
267..317
96.1%
+
17
1
0
0
intron-intronBREAKPOINTs
25500544
3
Homo Sapiens

XM_006722214.4
35..266
98.6%
+
17

XM_017024444.1
267..313
98.6%
+
17
1
0
0
intron-intronBREAKPOINTs
25500544
4
Homo Sapiens

XM_017024443.1
1..202
98.0%
-
17

XM_017024445.1
112..422
95.4%
+
17
0
65535
49936
intron-intron
5
Homo Sapiens

NM_181671.2
1..101
99.1%
+
17

XM_017024443.1
95..146
100.0%
-
17
0
8622
42179
intron-intron
6
Homo Sapiens

NM_181671.2
1..498
98.4%
-
17

XM_017024443.1
495..609
99.3%
-
17
0
8622
42179
intron-intron
7
Homo Sapiens

XR_245245.4
1..86
97.7%
-
4

XM_017024445.1
85..170
97.8%
-
17
1
0
0
exon-intron
8
Homo Sapiens

XM_017024444.1
1..83
100.0%
-
17
LOC107984867
XR_001752227.1
70..103
100.0%
-
16
1
0
0
intron-intron
9
Homo Sapiens

NM_181671.2
18..324
97.4%
-
17

XM_005269987.5
317..497
98.9%
+
10
1
0
0
intron-intron
10
Homo Sapiens
LINC02511
NR_149105.1
22..101
96.7%
-
4

XM_017024444.1
91..290
99.2%
-
17
1
0
0
intron-intron

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