Result for the search of Gene Name/NCBI ID(s): 'PID1'

Total of fusion sequences: 9 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	BC020883 ANNOTATION OF CHIMERA FUSION GenBank ID: BC020883 FASTA Head Gene (1) Alignment: PID1 | OMIM: 612930 Tail Gene (2) Alignment: SKIL | OMIM: 165340 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55022 2 - 229107557 229108539 1 0 protein-coding 6498 3 + 170396705 170396826 1 1 oncogene, tumor suppressor, protein-coding 1130 hg38 Updated: 2019-02-20 Owner: ChiTaRS	PID1 F5H314 Q7Z2X4 NM_017933.4	1..981 99.6%	- 2	SKIL C9J8R9 H7C4V3 I6QMM9 P12757 NM_001145098.2	977..1098 100.0%	+ 3	1 0 0	intron-exon
2 Homo Sapiens	BQ027803 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ027803 FASTA Head Gene (1) Alignment: NGRN | OMIM: 616718 Tail Gene (2) Alignment: PID1 | OMIM: 612930 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51335 15 - 90272060 90272208 3 1 protein-coding 55022 2 + 229024967 229025364 4 1 protein-coding 570 hg38 Updated: 2019-02-22 Owner: ChiTaRS	NGRN A0A087WWE0 Q9NPE2 NM_001033088.1	18..166 100.0%	- 15	PID1 F5H314 Q7Z2X4 NM_017933.4	145..541 99.8%	+ 2	1 0 0	exon-exon
3 Homo Sapiens	EC571025 ANNOTATION OF CHIMERA FUSION GenBank ID: EC571025 FASTA Head Gene (1) Alignment: PID1 | OMIM: 612930 Tail Gene (2) Alignment: CHD3 | OMIM: 602120 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55022 2 - 229157185 229157204 0 0 protein-coding 1107 17 - 7894552 7894948 2 1 oncogene, protein-coding 106 hg38 Updated: 2019-03-27 Owner: ChiTaRS	PID1 F5H314 Q7Z2X4 NM_001330158.1	1..20 100.0%	- 2	CHD3 H7C0J3 H7C2H0 H7C3H7 I3L1I4 I3L229 K7EPV1 Q12873 Q2TAZ1 XM_017024067.2	5..93 100.0%	- 17	1 0 0	intron-exon
4 Homo Sapiens	FN087943 ANNOTATION OF CHIMERA FUSION GenBank ID: FN087943 FASTA Head Gene (1) Alignment: PID1 | OMIM: 612930 Tail Gene (2) Alignment: ADAMTSL3 | OMIM: 609199 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55022 2 - 229076997 229077018 0 0 protein-coding 57188 15 + 83731411 83772231 0 0 oncogene, protein-coding 103 hg38 Updated: 2019-03-03 Owner: ChiTaRS	PID1 F5H314 Q7Z2X4 NM_001330158.1	2..23 100.0%	- 2	ADAMTSL3 P82987 XM_011521823.2	6..49 100.0%	+ 15	1 0 0	intron-intron
5 Homo Sapiens	BI496466 ANNOTATION OF CHIMERA FUSION GenBank ID: BI496466 FASTA Head Gene (1) Alignment: LOC105375933 Tail Gene (2) Alignment: PID1 | OMIM: 612930 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 105375933 8 - 85099321 85099354 2 0 ncRNA 55022 2 + 229023975 229024038 4 1 protein-coding 103 hg38 Updated: 2019-02-17 Owner: ChiTaRS	LOC105375933 XR_929118.2	13..46 100.0%	- 8	PID1 F5H314 Q7Z2X4 NM_017933.4	40..103 98.5%	+ 2	1 0 0	intron-exon
6 Homo Sapiens	EC573435 ANNOTATION OF CHIMERA FUSION GenBank ID: EC573435 FASTA Head Gene (1) Alignment: PID1 | OMIM: 612930 Tail Gene (2) Alignment: TSPAN13 | OMIM: 613139 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55022 2 - 229167914 229167937 0 0 protein-coding 27075 7 + 16784303 16784401 1 1 tumor suppressor, protein-coding 117 hg38 Updated: 2019-03-27 Owner: ChiTaRS	PID1 F5H314 Q7Z2X4 NM_001330158.1	10..32 100.0%	- 2	TSPAN13 O95857 Q6FGK0 NM_014399.3	18..117 97.0%	+ 7	1 0 0	intron-exon
7 Homo Sapiens	BI494580 ANNOTATION OF CHIMERA FUSION GenBank ID: BI494580 FASTA Head Gene (1) Alignment: NRXN1 | OMIM: 600565 Tail Gene (2) Alignment: PID1 | OMIM: 612930 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9378 2 + 50250445 50250851 1 0 protein-coding 55022 2 - 229033624 229033662 1 0 protein-coding 414 hg38 Updated: 2018-11-03 Owner: ChiTaRS	NRXN1 A0A0D9SEJ1 A0A0D9SEM5 A0A0D9SEP4 A0A0D9SEQ7 A0A0D9SF07 A0A0D9SF36 A0A0D9SFF4 A0A0D9SFY6 A0A0D9SG60 A0A0D9SG96 A0A0R4J2G7 A0A0U1RQP8 A0A0U1RR00 A0A0U1RRK7 A0A1B0GTL0 A0A1B0GU94 A0A1B0GUQ1 A0A1B0GUR2 A0A1B0GVF4 A0A1D5RMU6 A4FVB9 E7EQN4 E7ERL8 F5GYC7 F8WB18 H0Y568 H7BYC7 P58400 Q08AH0 Q49A31 Q9ULB1	1..407 99.8%	+ 2	PID1 F5H314 Q7Z2X4	370..408 97.5%	- 2	1 0 0	intron-intron
8 Homo Sapiens	BI493440 ANNOTATION OF CHIMERA FUSION GenBank ID: BI493440 FASTA Head Gene (1) Alignment: PID1 | OMIM: 612930 Tail Gene (2) Alignment: ANXA2 | OMIM: 151740 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 55022 2 - 229093242 229093765 1 0 protein-coding 302 15 + 60347336 60349186 16 1 protein-coding 489 hg38 Updated: 2019-02-17 Owner: ChiTaRS	PID1 F5H314 Q7Z2X4 NM_017933.4	1..68 98.0%	- 2	ANXA2 A0A024R5Z7 H0YKL9 H0YKN4 H0YKS4 H0YKV8 H0YKX9 H0YKZ7 H0YL33 H0YLE2 H0YLV6 H0YM50 H0YMD0 H0YMD9 H0YMM1 H0YMT9 H0YMU9 H0YMW4 H0YN28 H0YN42 H0YN52 H0YNA0 H0YNB8 H0YNP5 P07355 V9HW65 XM_017022090.1	17..482 100.0%	+ 15	1 0 0	intron-exon
9 Homo Sapiens	BU929920 ANNOTATION OF CHIMERA FUSION GenBank ID: BU929920 FASTA Head Gene (1) Alignment: UCK2 | OMIM: 609329 Tail Gene (2) Alignment: PID1 | OMIM: 612930 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7371 1 - 165897391 165897936 5 0 protein-coding 55022 2 + 229025409 229025592 4 1 protein-coding 778 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to PRK (PF00485, IPR006083) 197 193 246 1.1e-14 40.800 Phosphoribulokinase / Uridine kinase family Updated: 2019-02-21 Owner: ChiTaRS	UCK2 A0A024R912 A0A2R8Y653 Q9BZX2 XM_017002236.1	1..546 99.9%	- 1	PID1 F5H314 Q7Z2X4 NM_017933.4	536..722 95.1%	+ 2	1 0 0	intron-exon

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