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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PDS5A'

Total of fusion sequences: 19 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XR_001741184.2
1..385
99.5%
-
4

XM_011539805.1
381..494
100.0%
-
10
1
0
0
intron-intron
2
Homo Sapiens

XR_001741184.2
33..118
100.0%
+
4

XR_001741184.2
107..838
97.7%
-
4
0
39462
40406
exon-exon
3
Homo Sapiens

XR_001741184.2
1..544
98.5%
+
4

XR_001741184.2
479..603
95.6%
+
4
0
39462
40406
intron-intron
4
Homo Sapiens

NM_002568.3
22..381
99.5%
-
8

XR_001741185.1
274..408
97.1%
-
4
1
0
0
exon-intron
5
Homo Sapiens

NM_002568.3
1..560
99.9%
-
8

XR_001741185.1
29..568
95.4%
-
4
0
0
3407
exon-intron
6
Homo Sapiens

NM_002568.3
46..617
97.8%
-
8

XR_001741185.1
509..642
95.5%
-
4
1
0
0
exon-intron
7
Homo Sapiens

XR_001741184.2
1..40
100.0%
-
4

XR_001741184.2
40..80
100.0%
-
4
1
0
0
exon-exon
8
Homo Sapiens

XR_001741184.2
1..40
100.0%
-
4

XR_001741184.2
40..80
100.0%
-
4
1
0
0
exon-exon
9
Homo Sapiens

XM_005259191.3
27..116
96.4%
-
19

XR_001741185.1
43..126
100.0%
-
4
1
0
0
intron-intron
10
Homo Sapiens
ZNF271P 3..75
98.6%
+
18
56..77
100.0%
+
4
1
0
0
intron-intron

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