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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PDGFRB'

Total of fusion sequences: 13 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XR_001750344.2
1..641
100.0%
-
14

NM_002609.3
642..991
100.0%
-
5
0
13342
1287
exon-intronBREAKPOINTs
2
Homo Sapiens
ChimerDB
XM_011523089.2
19..247
99.2%
+
16

NM_002609.3
244..598
100.0%
+
5
1
0
0
exon-exon
3
Homo Sapiens

XR_001750344.2
1..2122
100.0%
-
14

NM_002609.3
2121..2598
100.0%
-
5
0
13342
1287
exon-exonBREAKPOINTs
4
Homo Sapiens

NM_001324106.1
1..1744
100.0%
-
5

NM_002609.3
1743..3486
100.0%
-
5
1
0
0
exon-exonBREAKPOINTs
5
Homo Sapiens

NM_005436.4
1..244
100.0%
-
10

NM_001355017.1
244..308
100.0%
-
5
1
0
0
exon-exonBREAKPOINTs
6
Homo Sapiens

XM_006719109.3
1..3280
100.0%
+
12

NM_002609.3
3281..5022
100.0%
-
5
1
0
0
exon-exonBREAKPOINTs
24628626
27176795
27824051
7
Homo Sapiens

XM_006719109.3
16..3304
100.0%
+
12

NM_002609.3
3305..5046
100.0%
-
5
1
0
0
exon-exonBREAKPOINTs
24628626
27176795
27824051
8
Homo Sapiens

NM_002609.3
1..550
99.3%
+
5

XM_017023352.2
550..800
99.7%
-
16
1
0
0
intron-intronBREAKPOINTs
9
Homo Sapiens

XM_017015096.1
1..2502
100.0%
-
9

NM_001355017.1
2501..4146
100.0%
-
5
1
0
0
exon-exon
10
Homo Sapiens

XM_017025186.1
1..700
100.0%
+
17

NM_002609.3
699..2442
99.9%
-
5
1
0
0
exon-exon

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