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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PDGFB'

Total of fusion sequences: 22 (from 1873828 parsed EST/mRNAs. Last update 2020-01-23 14:57:17)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens
ChimerDB
NM_000088.3
1..141
100.0%
-
17

NM_033016.3
141..202
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs
12
Homo Sapiens
ChimerDB
NM_000088.3
1..141
100.0%
-
17

NM_033016.3
141..464
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs
13
Homo Sapiens
ChimerDB
NM_000088.3
1..358
100.0%
-
17

NM_033016.3
358..419
100.0%
-
22
8
0
212
exon-exonBREAKPOINTs
14
Homo Sapiens
ChimerDB
NM_000088.3
1..520
100.0%
-
17

NM_033016.3
520..581
100.0%
-
22
8
0
939
exon-exonBREAKPOINTs
15
Homo Sapiens

NM_000088.3
1..662
99.4%
-
17

NM_002608.3
662..799
100.0%
-
22
0
2617
339
exon-intronBREAKPOINTs
16
Homo Sapiens

NM_000088.3
1..676
99.9%
-
17

NM_033016.3
666..1370
100.0%
-
22
0
1941
33
exon-intronBREAKPOINTs
17
Homo Sapiens

NM_000088.3
1..560
99.5%
-
17

NM_033016.3
561..1953
99.8%
-
22
0
1391
17
intron-intronBREAKPOINTs
18
Homo Sapiens

NM_000088.3
1..549
100.0%
-
17

NM_033016.3
547..3369
99.5%
-
22
0
69
2324
intron-exonBREAKPOINTs
19
Homo Sapiens

NM_000088.3
4..331
99.1%
-
17

NM_033016.3
332..837
100.0%
-
22
0
69
2324
exon-intronBREAKPOINTs
20
Homo Sapiens

NM_000088.3
1..280
100.0%
-
17

NM_002608.3
277..313
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs

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