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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PDGFB'

Total of fusion sequences: 21 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_000088.3
1..444
99.8%
-
17

NM_033016.3
444..522
100.0%
-
22
0
3
1092
exon-exonBREAKPOINTs
2
Homo Sapiens
SplGraphs
NM_000088.3
1..289
98.0%
-
17

NM_033016.3
289..350
100.0%
-
22
0
3
1468
exon-exonBREAKPOINTs
3
Homo Sapiens
SplGraphs
NM_000088.3
1..128
99.3%
-
17

NM_033016.3
126..189
100.0%
-
22
8
2
566
exon-exonBREAKPOINTs
4
Homo Sapiens
SplGraphs
NM_000088.3
9..225
100.0%
-
17

NM_033016.3
222..285
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs
5
Homo Sapiens
SplGraphs
NM_000088.3
1..109
100.0%
-
17

NM_033016.3
109..431
100.0%
-
22
8
0
212
exon-exonBREAKPOINTs
6
Homo Sapiens
SplGraphs
NM_000088.3
1..307
98.7%
-
17

NM_033016.3
307..368
100.0%
-
22
8
0
302
exon-exonBREAKPOINTs
7
Homo Sapiens
SplGraphs
NM_000088.3
1..199
100.0%
-
17

NM_033016.3
199..260
100.0%
-
22
8
0
322
exon-exonBREAKPOINTs
8
Homo Sapiens
SplGraphs
NM_000088.3
1..191
100.0%
-
17

NM_033016.3
191..233
100.0%
-
22
8
0
302
exon-exonBREAKPOINTs
9
Homo Sapiens
SplGraphs
NM_000088.3
1..1007
99.7%
-
17

NM_033016.3
1007..1068
100.0%
-
22
8
0
392
exon-exonBREAKPOINTs
10
Homo Sapiens
SplGraphs
NM_000088.3
1..141
100.0%
-
17

NM_033016.3
141..464
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs

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