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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PDGFB'

Total of fusion sequences: 21 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_000088.3
1..444
99.8%
-
17

NM_033016.3
444..522
100.0%
-
22
0
3
1092
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..199
100.0%
-
17

NM_033016.3
199..260
100.0%
-
22
8
0
322
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..307
98.7%
-
17

NM_033016.3
307..368
100.0%
-
22
8
0
302
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
9..225
100.0%
-
17

NM_033016.3
222..285
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..1007
99.7%
-
17

NM_033016.3
1007..1068
100.0%
-
22
8
0
392
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..109
100.0%
-
17

NM_033016.3
109..431
100.0%
-
22
8
0
212
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..128
99.3%
-
17

NM_033016.3
126..189
100.0%
-
22
8
2
566
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..191
100.0%
-
17

NM_033016.3
191..233
100.0%
-
22
8
0
302
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..289
98.0%
-
17

NM_033016.3
289..350
100.0%
-
22
0
3
1468
exon-exonBREAKPOINTs
Homo SapiensSplGraphs
NM_000088.3
1..141
100.0%
-
17

NM_033016.3
141..464
100.0%
-
22
8
0
0
exon-exonBREAKPOINTs

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