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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PDGFA'

Total of fusion sequences: 7 (from 6,491,097 parsed EST/mRNAs. Last update: 2020-08-30 12:24:27)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_001025070.1
1..326
100.0%
-
5

XM_011515415.1
325..440
96.9%
+
7
1
0
0
exon-exon
2
Homo Sapiens

XM_011515415.1
20..61
96.9%
-
7

NM_001242397.1
47..564
97.4%
-
12
1
0
0
exon-intron
3
Homo Sapiens

XM_011515415.1
5..32
96.2%
-
7

XM_011539802.2
22..413
99.0%
+
10
1
0
0
exon-exon
4
Homo Sapiens

NM_006233.4
8..410
99.6%
-
19

XM_011515416.1
409..430
100.0%
+
7
1
0
0
exon-exon
5
Homo Sapiens

NM_015344.2
8..468
99.8%
+
8

XM_011515416.1
465..486
100.0%
+
7
1
0
0
exon-exon
6
Homo Sapiens

XM_011515415.1
7..30
100.0%
-
7

NM_007106.3
27..524
99.8%
+
13
1
0
0
exon-exon
7
Homo Sapiens

XM_024449344.1
1..393
99.5%
-
13

XM_011515415.1
391..438
100.0%
+
7
1
0
0
exon-exon

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