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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PDAP1'

Total of fusion sequences: 16 (from 2,403,910 parsed EST/mRNAs. Last update 2020-02-09 10:24:42)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_014891.6
2..301
100.0%
-
7

NM_005730.3
297..707
99.3%
-
12
1
0
0
exon-exon
2
Mus musculus

NM_001033313.3
10..1207
100.0%
-
5

NM_001289844.1
715..1232
99.3%
-
7
1
0
0
exon-intron
3
Mus musculus

NM_001033313.3
22..1219
100.0%
-
5

NM_001289844.1
727..1233
99.3%
-
7
1
0
0
exon-intron
4
Mus musculus

NM_001033313.3
16..446
99.6%
-
5
Gjd3
Q91YD1

NM_178596.2
425..450
100.0%
-
11
1
0
0
exon-exon
5
Mus musculus

NM_001033313.3
1..1234
100.0%
-
5

NM_001289844.1
741..1249
99.1%
-
7
1
0
0
exon-intron
6
Mus musculus

NM_001033313.3
1..325
100.0%
-
5

XM_017315648.1
323..363
100.0%
-
13
1
0
0
exon-intron
7
Homo Sapiens

NM_014891.6
1..774
99.4%
-
7
LOC105375284
XR_001745212.2
765..797
96.6%
-
7
1
0
0
exon-intron
8
Homo Sapiens
CCDC144NL-AS1
NR_104185.1
2..32
100.0%
+
17

NM_014891.6
30..97
98.5%
-
7
1
0
0
intron-exon
9
Homo Sapiens
LOC100287653 1..417
95.3%
+
12

NM_014891.6
28..797
99.9%
-
7
1
0
0
intron-exon
10
Homo Sapiens

NM_014891.6
1..199
96.7%
+
7
LOC105377567
XR_001741469.1
189..208
100.0%
+
4
1
0
0
exon-intron

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