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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PCGF1'

Total of fusion sequences: 3 (from 3,568,812 parsed EST/mRNAs. Last update 2020-07-14 10:36:55)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_017015585.1
4..218
99.6%
-
10
PCGF1
Q9BSM1

XM_024453181.1
217..434
96.8%
-
2
1
0
0
exon-exon
2
Homo Sapiens
PCGF1
Q9BSM1
1..906
100.0%
-
2
895..924
100.0%
+
11
1
0
0
intron-intron
3
Homo Sapiens
PCGF1
Q9BSM1

XM_024453181.1
10..255
99.2%
-
2

NM_001734.4
249..315
100.0%
-
12
1
0
0
exon-exon

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