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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PCCA'

Total of fusion sequences: 38 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NR_135232.1
28..83
100.0%
-
3

XR_001749568.1
78..525
99.8%
-
13
1
0
0
exon-exon
2
Homo Sapiens

XR_931611.2
85..251
95.3%
+
13

XR_001749568.1
252..272
95.3%
+
13
1
0
0
intron-intronBREAKPOINTs
18458336
25500544
3
Homo Sapiens

NM_001243766.1
4..278
99.0%
-
1

XR_001749568.1
250..306
98.3%
+
13
2
10
0
intron-intron
4
Homo Sapiens

NM_001243766.1
1..282
99.0%
-
1

XR_001749568.1
254..318
97.0%
+
13
2
10
0
intron-intron
5
Homo Sapiens

XR_001749568.1
14..445
98.2%
-
13

XR_001749568.1
346..612
97.6%
+
13
2
6
0
intron-intron
6
Homo Sapiens

XR_001749568.1
6..438
98.7%
-
13

XR_001749568.1
289..601
96.8%
+
13
2
6
0
intron-intron
7
Homo Sapiens
AC140658.2 1..29
100.0%
-
16
19..38
100.0%
+
13
3
1
0
intron-intron
8
Homo Sapiens
IGHV3OR16-10
A0A075B7F0
1..25
100.0%
+
16
19..38
100.0%
+
13
1
0
0
intron-intron
9
Homo Sapiens
IGHV3OR16-10
A0A075B7F0
1..25
100.0%
+
16
19..38
100.0%
+
13
1
0
0
intron-intron
10
Homo Sapiens
IGHV3OR16-10
A0A075B7F0
1..25
100.0%
+
16
19..39
100.0%
+
13
1
0
0
intron-intron

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