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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PCBP2'

Total of fusion sequences: 23 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Mus musculus
1..728
100.0%
+
MT

XM_011245496.1
726..760
96.7%
-
15
1
0
0
intron-intron
12
Mus musculus

XM_006519274.2
1..261
100.0%
-
14

XM_011245496.1
225..318
95.5%
+
15
1
0
0
intron-intron
13
Mus musculus

XM_011245496.1
19..117
97.5%
+
15

XR_379423.2
58..644
98.0%
+
9
1
0
0
intron-intron
14
Mus musculus

XM_006520582.3
70..675
99.4%
+
15

NM_145460.2
661..691
100.0%
+
14
1
0
0
exon-intron
15
Mus musculus

XM_011245496.1
19..87
97.2%
+
15

XM_006514433.2
48..676
98.6%
-
11
1
0
0
intron-intron
16
Mus musculus

XM_011245496.1
1..57
96.5%
+
15

NM_009008.3
20..410
99.8%
-
15
1
0
0
intron-exon
17
Mus musculus

XM_006520582.3
26..491
99.6%
+
15

NM_153567.3
466..521
97.7%
-
5
1
0
0
exon-intron
18
Mus musculus

XM_006520582.3
25..522
99.8%
+
15

ENSMUST00000102573
446..588
95.5%
-
2
1
0
0
exon-intron
19
Mus musculus

XM_011245496.1
19..74
98.2%
+
15
Gid8
Q9D7M1

NM_001289652.1
48..963
99.0%
+
2
1
0
0
intron-exon
20
Mus musculus

NM_011079.2
1..143
95.5%
-
5

XM_011245496.1
7..664
99.7%
-
15
1
0
0
intron-exon

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