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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PCBP2'

Total of fusion sequences: 28 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_031989.4
1..79
96.2%
+
12

XM_011542494.3
72..523
100.0%
-
1
2
0
8
exon-exon
Homo Sapiens
NM_031989.4
1..423
99.3%
+
12
AC009495.4
NA
421..451
100.0%
-
2
1
0
0
exon-intron
Homo Sapiens SNX32
Q86XE0

XM_024448419.1
24..179
100.0%
+
11

NM_001128912.1
176..514
100.0%
-
12
1
0
0
exon-exon
Homo Sapiens
NM_006301.3
1..219
95.9%
-
12

NM_031989.4
210..684
100.0%
+
12
1
0
0
exon-exon
Homo Sapiens
NM_001135162.1
1..356
100.0%
+
22

NM_031989.4
350..465
99.2%
-
12
1
0
0
intron-exon
Homo Sapiens
XM_006719780.3
1..56
100.0%
-
13

NM_001128911.1
56..142
97.8%
+
12
1
0
0
exon-exon
Homo Sapiens
NM_031989.4
6..231
97.8%
-
12

XM_011541114.3
227..305
98.8%
+
1
1
0
0
intron-intron
Homo Sapiens
ATP6
39..285
99.6%
+
MT

NM_001128912.1
278..555
100.0%
+
12
1
0
0
exon-intron
Homo Sapiens
NM_001128912.1
1..19
100.0%
-
12
ZNF740
Q8NDX6

XR_944519.1
20..253
100.0%
-
12
1
0
0
intron-exon
Homo Sapiens
NM_031989.4
8..298
96.4%
+
12

XM_011518791.2
296..318
100.0%
-
9
1
0
0
exon-intron

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