Result for the search of Gene Name/NCBI ID(s): 'PCBD1'

Total of fusion sequences: 3 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	AA565155 ANNOTATION OF CHIMERA FUSION GenBank ID: AA565155 FASTA Head Gene (1) Alignment: PCBD1 | OMIM: 126090 Tail Gene (2) Alignment: CDRT1 | OMIM: 604596 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5092 10 - 70882280 70882444 1 1 protein-coding 374286 17 + 15603413 15603931 0 0 protein-coding 190 hg38 Updated: 2019-04-13 Owner: ChiTaRS	PCBD1 P61457 Q6FGB3 NM_001323004.1	8..172 99.4%	- 10	CDRT1 A0A087WSX6 I3L073 J3KTF7 J3QLS4 L0R4W0 O95170 Q9BXD7 NM_001282540.1	103..183 96.0%	+ 17	1 0 0	exon-intron
2 Homo Sapiens	AA736615 ANNOTATION OF CHIMERA FUSION GenBank ID: AA736615 FASTA Head Gene (1) Alignment: VAV2 | OMIM: 600428 Tail Gene (2) Alignment: PCBD1 | OMIM: 126090 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7410 9 - 133965492 133965513 0 0 oncogene, protein-coding 5092 10 + 70883508 70883929 1 1 protein-coding 441 hg38 Updated: 2019-11-15 Owner: ChiTaRS	VAV2 P52735 XM_017015108.1	1..22 100.0%	- 9	PCBD1 P61457 Q6FGB3 NM_000281.3	20..441 99.8%	+ 10	1 0 0	intron-exon
3 Homo Sapiens	BE645994 ANNOTATION OF CHIMERA FUSION GenBank ID: BE645994 FASTA Head Gene (1) Alignment: PCBD1 | OMIM: 126090 Tail Gene (2) Alignment: PCBD1 | OMIM: 126090 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5092 10 + 70883510 70883868 1 1 protein-coding 5092 10 - 70883874 70883901 1 1 protein-coding 366 hg38 Updated: 2019-04-13 Owner: ChiTaRS	PCBD1 P61457 Q6FGB3 NM_000281.3	2..355 99.8%	+ 10	PCBD1 P61457 Q6FGB3 NM_000281.3	339..366 100.0%	- 10	1 0 0	exon-exon

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