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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 60 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
51
Homo Sapiens

XM_005250861.3
6..329
100.0%
-
8
C8orf44-SGK3
NM_001204173.1
85..365
97.5%
-
8
1
0
0
exon-intron
52
Homo Sapiens

XM_006714093.3
6..197
95.7%
-
4

NM_002568.3
24..227
100.0%
+
8
1
0
0
intron-exon
53
Homo Sapiens

XM_005250861.3
8..494
100.0%
-
8

XM_017027379.1
491..513
100.0%
+
19
1
0
0
exon-intron
54
Homo Sapiens

XM_005250861.3
1..302
100.0%
-
8
EDIL3
O43854

NM_005711.4
296..319
100.0%
-
5
1
0
0
exon-intron
55
Homo Sapiens

NM_002568.3
9..306
100.0%
-
8

XR_002959512.1
306..346
97.6%
+
3
1
0
0
exon-intron
56
Homo Sapiens
EPC1
Q9H2F5

XM_006717510.2
1..21
100.0%
+
10

XM_005250861.3
12..302
100.0%
+
8
1
0
0
intron-exon
57
Homo Sapiens

NM_001085458.1
15..136
95.1%
+
11

NM_002568.3
127..420
98.7%
-
8
1
0
0
intron-intron
58
Homo Sapiens

XM_005250861.3
8..312
100.0%
-
8

XM_011528231.2
311..346
100.0%
-
19
1
0
0
exon-intron
59
Homo Sapiens

XM_011518001.1
18..90
100.0%
-
9

XM_005250861.3
89..302
100.0%
-
8
1
0
0
intron-exon
60
Homo Sapiens

NM_002568.3
1..408
98.3%
-
8

XM_011530379.3
409..440
96.7%
-
22
1
0
0
exon-intron

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