Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 66 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
41
Homo Sapiens

NM_183353.2
1..46
95.7%
+
X

NM_002568.3
44..80
100.0%
+
8
0
0
0
exon-exon
42
Homo Sapiens

NM_002568.3
1..81
95.0%
+
8

XM_011533624.3
69..107
96.9%
+
3
1
0
0
exon-intron
43
Homo Sapiens

XR_001741185.1
16..279
95.3%
-
4

NM_002568.3
26..291
98.2%
-
8
0
0
0
intron-exon
44
Homo Sapiens
ACVR2A
P27037
1..100
99.0%
-
2
81..101
100.0%
-
8
1
0
0
intron-intron
45
Homo Sapiens

XM_017022091.1
83..324
99.6%
-
15

NM_002568.3
324..506
97.8%
+
8
1
0
0
exon-exon
46
Homo Sapiens

XM_005250861.3
1..213
100.0%
-
8

XM_017007034.1
206..592
100.0%
+
3
1
0
0
exon-exon
47
Homo Sapiens

XM_005250861.3
8..321
100.0%
-
8

XM_024448468.1
320..345
100.0%
+
11
1
0
0
exon-intron
48
Homo Sapiens

NM_002568.3
24..226
98.6%
-
8
PABPC1P13 53..240
95.1%
-
16
1
0
0
exon-exon
49
Homo Sapiens

NM_018012.4
1..24
100.0%
+
1

XM_005250861.3
2..201
98.0%
+
8
1
0
0
intron-exon
50
Homo Sapiens

NM_002568.3
1..769
98.9%
-
8

NM_207308.2
531..804
97.8%
+
1
1
0
0
exon-intron

T o p