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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 60 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
31
Homo Sapiens

NM_002568.3
1..560
99.9%
-
8

XR_001741185.1
29..568
95.4%
-
4
0
0
3407
exon-intron
32
Homo Sapiens

XM_005250861.3
8..351
100.0%
-
8
LINC00589
Q9BTQ3

ENST00000506121
344..372
100.0%
-
8
1
0
0
exon-intron
33
Homo Sapiens

XM_005250861.3
8..299
100.0%
-
8
LINC00589
Q9BTQ3

ENST00000506121
292..320
100.0%
-
8
1
0
0
exon-intron
34
Homo Sapiens

XM_017003577.2
3..24
95.5%
-
2

NM_002568.3
16..97
96.3%
-
8
1
0
0
intron-exon
35
Homo Sapiens

ENST00000519004
8..27
100.0%
+
8

NM_014983.2
22..101
98.8%
-
5
1
0
0
intron-exon
36
Homo Sapiens

NM_001762.3
1..111
100.0%
-
7

XM_005250861.3
111..245
98.5%
-
8
1
0
0
intron-exon
37
Homo Sapiens

XM_005250861.3
1..2757
100.0%
-
8

XM_011527354.1
2512..2777
97.8%
+
19
1
0
0
exon-intron
38
Homo Sapiens
LOC105375488
XR_927935.1
10..44
97.2%
+
7

NM_002568.3
45..377
99.7%
+
8
1
0
0
intron-exon
39
Homo Sapiens

NM_002568.3
1..81
95.0%
+
8

XM_011533624.3
69..107
96.9%
+
3
1
0
0
exon-intron
40
Homo Sapiens
ACVR2A
P27037
1..100
99.0%
-
2
81..101
100.0%
-
8
1
0
0
intron-intron

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