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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 60 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
21
Homo Sapiens
MIR7705 1..436
99.7%
+
8

XM_005250861.3
437..564
99.7%
+
8
1
0
0
intron-exon
22
Homo Sapiens
MIR7705 1..436
100.0%
+
8

XM_005250861.3
437..554
100.0%
+
8
1
0
0
intron-exon
23
Homo Sapiens

NM_002568.3
1..356
100.0%
-
8

NM_183353.2
208..372
95.8%
-
X
1
0
0
exon-exon
24
Homo Sapiens

NM_002568.3
6..627
100.0%
-
8

NM_183353.2
479..644
95.8%
-
X
1
0
0
exon-exon
25
Homo Sapiens

NM_002568.3
8..522
100.0%
-
8

NM_183353.2
374..533
95.7%
-
X
1
0
0
exon-exon
26
Homo Sapiens

NM_183353.2
1..384
95.3%
+
X

NM_002568.3
18..444
100.0%
+
8
0
0
1727
exon-exon
27
Homo Sapiens

NM_183353.2
1..163
95.8%
+
X

XM_005250861.3
15..224
100.0%
+
8
1
0
0
exon-exon
28
Homo Sapiens

XM_005250861.3
1..210
100.0%
-
8

NM_183353.2
62..227
95.8%
-
X
1
0
0
exon-exon
29
Homo Sapiens

NM_002568.3
22..381
99.5%
-
8

XR_001741185.1
274..408
97.1%
-
4
1
0
0
exon-intron
30
Homo Sapiens

NM_002568.3
46..617
97.8%
-
8

XR_001741185.1
509..642
95.5%
-
4
1
0
0
exon-intron

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