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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 63 (from 3,531,238 parsed EST/mRNAs. Last update 2020-07-10 14:21:01)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
21
Homo Sapiens
LOC105370120
XR_941762.2
1..547
95.0%
+
13

NM_002568.3
19..552
98.1%
-
8
2
154
143
intron-exon
22
Homo Sapiens

XM_005250861.3
1..200
100.0%
-
8

NM_001282175.1
193..223
100.0%
+
19
3
6
0
exon-intron
23
Homo Sapiens

NM_001282175.1
1..25
100.0%
-
19

XM_005250861.3
18..328
99.1%
+
8
3
6
0
intron-exon
24
Homo Sapiens
MIR7705 1..436
100.0%
+
8

XM_005250861.3
437..554
100.0%
+
8
1
0
0
intron-exon
25
Homo Sapiens
MIR7705 2..445
100.0%
+
8

XM_005250861.3
446..540
100.0%
+
8
1
0
0
intron-exon
26
Homo Sapiens
MIR7705 1..436
99.7%
+
8

XM_005250861.3
437..564
99.7%
+
8
1
0
0
intron-exon
27
Homo Sapiens
MIR7705 1..428
97.7%
+
8

XM_005250861.3
429..636
97.7%
+
8
1
0
0
intron-exon
28
Homo Sapiens

NM_183353.2
1..163
95.8%
+
X

XM_005250861.3
15..224
100.0%
+
8
4
0
0
exon-exon
29
Homo Sapiens

XM_005250861.3
1..210
100.0%
-
8

NM_183353.2
62..227
95.8%
-
X
4
0
0
exon-exon
30
Homo Sapiens

NM_002568.3
6..627
100.0%
-
8

NM_183353.2
479..644
95.8%
-
X
4
0
0
exon-exon

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