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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PABPC1'

Total of fusion sequences: 19 (from 1934659 parsed EST/mRNAs. Last update 2020-01-27 10:09:24)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_011245339.2
1..2805
100.0%
-
15

XM_017317615.1
1317..2822
98.0%
+
17
8
0
44
exon-intron
2
Mus musculus

XM_011245339.2
11..684
100.0%
-
15

XM_017317615.1
299..689
98.0%
+
17
8
95
250
exon-intron
3
Mus musculus

XM_017317615.1
1..139
99.3%
-
17

XM_011245339.2
130..329
100.0%
-
15
8
29
877
intron-exon
4
Mus musculus

XM_011245339.2
32..960
99.3%
-
15

XM_017317615.1
198..968
97.4%
+
17
8
29
877
exon-intron
5
Mus musculus

XM_011245339.2
4..656
100.0%
-
15

XM_017317615.1
76..661
98.2%
+
17
8
21
4
exon-intron
6
Mus musculus

XM_011245339.2
44..986
98.4%
-
15

XM_017317615.1
400..1007
95.8%
+
17
8
21
4
exon-intron
7
Mus musculus

XM_011245339.2
4..655
99.7%
-
15

XM_017317615.1
182..667
97.6%
+
17
8
7
2
exon-intron
8
Mus musculus

XM_011245339.2
1..542
98.0%
-
15

XM_017317615.1
67..559
95.5%
+
17
8
7
2
exon-intron
9
Mus musculus

XM_011245339.2
1..582
100.0%
-
15

XM_017317615.1
466..597
95.5%
+
17
8
3
0
exon-intron
10
Mus musculus

XM_011245339.2
1..428
99.8%
-
15

XM_017317615.1
312..447
95.6%
+
17
8
1
0
exon-intron

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